Highlights
Homework 3: Computational Neuroscience
Consider the following system of equations
V is the membrane voltage and w is channel conductance.
A) Plot the nullclines of the system for a = 0.1, c = 0, b =1
B) Plot the phase flow using “quiver” in Matlab.
C) Plot the phase dynamics using the ode solver ode45. Also plot the time series for and w
D) Also plot the phase dynamics and time series for c = 0.2, b = 0.02
E) Compute the fixed points for I = 0. Compute linear system matrix (Jacobian) around this fixed point. Comment on the stability of the system for a,b and c
F) Plot the bifurcation diagram with I as the bifurcation parameter. Plot in 2D for V* vs I and w* vs I
This is the famous FitzHugh Nagumo equations! Model of Hodgkin-Huxley model explaining almost all the relevant mechanisms that HH can.
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